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Table 6 Result of optization for gene coding for prochymosin and comparison with experimental result from Menzella’s study

From: Novel methods to optimize gene and statistic test for evaluation – an application for Escherichia coli

Method CAI GC Patterns matching
Menzella 0.72 0.49 6 nucleotides 7 nucleotides 8 nucleotides 9 nucleotides Total
Jcat 0.96 0.50 177 69 22 12 280
Eugene 0.94 0.50 48 20 6 2 76
HEGP 0.81 0.51 173 55 15 6 249
DHEG 0.73 0.50 216 61 13 1 291
NN 0.47 0.49 185 57 20 7 269
NNP 0.67 0.50 204 68 26 13 311
NND 0.64 0.50 198 63 17 4 282
Linear 0.52 0.52 185 64 13 2 264