Table 2 Computational time and peak memory usage of MARV by varying sample size, chromosomal size and number of phenotypes
From: MARV: a tool for genome-wide multi-phenotype analysis of rare variants
Number of phenotypes (number of fitted models) | Chr 1 (249 Mbp) | Chr 22 (35 Mbp) |
|---|---|---|
N = 2,405 | h:min:s (memory) | h:min:s (memory) |
2 (3) | 4:06:54 (215 MB) | 00:38:04 (260 MB) |
4 (15) | 3:51:23 (215 MB) | 00:38:37 (260 MB) |
8 (63) | 5:07:11 (215 MB) | 00:55:58 (260 MB) |
N = 4,809 | h:min:s (memory) | h:min:s (memory) |
2 (3) | 14:47:34 (780 MB) | 02:26:00 (500 MB) |
4 (15) | 13:40:11 (780 MB) | 02:26:10 (600 MB) |
8 (63) | 17:26:08 (780 MB) | 03:03:00 (600 MB) |