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Table 3 This table shows the main results comparing the feature selection benchmarks of our approach with Lasso, 1-SVM, and Maldi-Quant. These are averages over 10 repetitions of a 5-fold cross-validation. Note that these results have been calculated based on the highest accuracy criterion for all classifiers with between 10 and 30 selected features. This particularly means that better accuracy values might be achieved for the individual methods if less sparse feature vectors would be allowed. For more details see text

From: Sparse Proteomics Analysis – a compressed sensing-based approach for feature selection and classification of high-dimensional proteomics mass spectrometry data

 

SPA

Lasso

1-SVM

Maldi-Quant

Dataset

Feat. [e]

Sens [f]

Spec [g]

B. Acc [h]

Feat.

Sens

Spec

B. Acc

Feat.

Sens

Spec

B. Acc

Feat

Sens

Spec

B. Acc

P. CA - UHL

20.48

0.975

0.949

0.962

29.94

0.969

0.939

0.954

27.72

0.964

0.947

0.955

21

0.888

0.888

0.888

P. CA - UHh

17.1

0.986

0.975

0.981

26.46

0.966

0.969

0.967

29.68

0.966

0.976

0.971

17

0.975

0.963

0.969

  1. [e]Feat.: Number of features
  2. [f]Sens: Sensitivity (T P/(T P+F N))
  3. [g]Spec: Specificity (T N/(F P+T N))
  4. [h]B. Acc: Balanced Accuracy (\( \frac {\text {sens.} + \text {spec.}}{2}\))