Skip to main content

Table 2 List of 35 new cold related genes identified using the co-expression behavior with known and well characterized genes

From: Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat

Probe ID Description wM sN sM wN
Ta.10319.1.A1_s_at Myb-like 4 3.8 5.2 1.7
Ta.10857.1.A1_at Cluster: Os10g0566400 protein 2.1 2.8 2 2.9
Ta.13134.1.A1_at Immediate early protein ICP0 4.6 3.9 5 4.2
Ta.13193.1.S1_at NADH-ubiquinone oxidoreductase 3.7 3.5 3.5 3.2
Ta.13239.1.S1_at Pherophorin-C1 protein precursor 4.9 4.8 4.8 5.3
Ta.13595.1.A1_at BQ169949 3 2.8 2.6 2.9
Ta.1722.1.S1_at TC434908 4 2.7 4 2.5
Ta.18391.1.S1_at CA635688 1.9 1.7 1.8 1.7
Ta.18720.1.S1_a_at Gamma-thionin (Defensin-like protein 1) 6.5 6 5.4 4.7
Ta.19327.1.S1_at Fe(III) dicitrate ABC transporter 3.6 3 3.8 2.8
Ta.22063.1.S1_s_at TC421941 3.1 3.3 3.2 3.4
Ta.22766.1.S1_a_at TC445245 6.9 7.3 8 7.3
Ta.23419.1.S1_x_at High molecular mass early light-inducible protein 2.6 3.5 2.8 2.8
Ta.24761.2.S1_at TC376085 1.8 1.2 1.7 1.1
Ta.27719.1.S1_at 5-oxoprolinase; n = 1; Sphingomonas wittichii 5.2 5.2 5.1 5
Ta.27719.2.S1_x_at TC448971 2.3 2.2 2.6 2
Ta.7053.1.S1_at TC427799 4.1 3.7 4 3.8
Ta.7091.1.S1_at TC37493 (P5CS2) 2.9 2.6 3 2.6
Ta.7934.3.S1_at HNH nuclease 4.8 3.3 4.3 3.9
Ta.9600.1.S1_x_at Low molecular mass early light-inducible protein 2.7 2.7 2.8 2.7
TaAffx.134872.1.S1_at TC434386 (Ycf1) 1.1 1.3 1 1.1
TaAffx.144000.1.S1_s_at Humulus lupulus 26S ribosomal RNA gene 5.6 2.3 5.8 1.9
TaAffx.34169.1.S1_at TC396129 (embryonic protein DC-8) 4.5 3.5 3.4 5
TaAffx.73215.1.S1_at TC407368 3.1 2.7 3.2 2.2
TaAffx.38397.1.A1_at Express protein similar to Os03g01841100 2.9 3.3 3.0 3.0
TaAffx.97142.1.S1_at weakly similar to UniRef100_Q2IMJ3 3.6 3.2 2.7 3.6
Ta.13153.1.S1_s_at Cluster: Biotin synthesis protein 0.2 2.2 0.2 1.4
Ta.13232.1.S1_at Cluster: Sterol desaturase family protein 2.4 3.4 1.4 3.4
Ta.13232.2.S1_at Cluster: Sterol desaturase family protein 2 2.1 0.7 4
Ta.13784.1.S1_at Cluster: BLT14.1 protein 5.4 5.7 4 6.4
Ta.14903.1.S1_at Cluster: Chalcone synthase 4.6 2.3 4.1 1.7
Ta.19303.1.S1_at Cluster: Expressed protein 3.1 4.3 2.8 4.9
Ta.28533.1.S1_at Cluster: PS II 10 kDa protein 1.9 2.7 1.8 4.7
TaAffx.116865.2.S1_at LTPL114 - Protease inhibitor/seed storage/LTP 4.8 5.3 3.7 6
TaAffx.124475.1.A1_at Cluster: Hblt14.2 protein 2.9 4.1 1.4 6.4
TaAffx.144000.1.S1_s_at Humulus lupulus 26S 5.6 2.3 5.8 1.9
TaAffx.34169.1.S1_at TC396129 4.5 3.5 2.8 5
  1. Numbers in column 3–6 represent the fold change between the min and the max of the expression level across the experimental time points