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Table 2 Sample details

From: AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data

Sample Species Location Sex Coverage Study
PB7 U. maritimus Spitsbergen, Svalbard F 176.2X Miller et al. 2012 [18]
PB12 U. maritimus Qaanaq, Greenland F 26.0X Liu et al. 2014 [17]
PB68 U. maritimus Qaanaq, Greenland F 26.1X Liu et al. 2014 [17]
PB105 U. maritimus Disko West, Greenland F 26.2X Liu et al. 2014 [17]
OFS01 U. arctos Östanvik, Sweden F 22.8X Liu et al. 2014 [17]
RF01 U. arctos Ruokolahti, Finland F 20.9X Liu et al. 2014 [17]
SJS01 U. arctos Slakka, Sweden F 15.2X Liu et al. 2014 [17]
Swe U. arctos Dalarna, Sweden F 11.0X Cahill et al. 2015 [11]
Den U. arctos Denali Natl. Park, AK F 12.1X Cahill et al. 2013 [10]
GP01 U. arctos Glacier Park, Montana M 16.8X Liu et al. 2014 [17]
GRZ U. arctos Kenai Peninsula, AK F 83.6X Miller et al. 2012 [18]
ABC01 U. arctos Baranof Island, AK M 20.0X Liu et al. 2014 [17]
ABC02 U. arctos Baranof Island, AK F 18.4X Liu et al. 2014 [17]
ABC03 U. arctos Chichagof Island, AK M 19.6X Liu et al. 2014 [17]
ABC04 U. arctos Chichagof Island, AK M 18.8X Liu et al. 2014 [17]
ABC05 U. arctos Chichagof Island, AK F 22.4X Liu et al. 2014 [17]
ABC06 U. arctos Admiralty Island, AK F 19.5X Liu et al. 2014 [17]
Adm1 U. arctos Admiralty Island, AK F 12.1X Cahill et al. 2013 [10]
Adm2 U. arctos Admirality Island, AK F 76.5X Miller et al. 2012 [18]
Bar U. arctos Baranof Island, AK M 49.1X Miller et al. 2012 [18]
Chi1 U. arctos Chichagof Island, AK F 9.2X Cahill et al. 2015 [11]
Chi2 U. arctos Chichagof Island, AK F 10.2X Cahill et al. 2015 [11]
Uam U. americanus Pennsylvania M 11.6X Cahill et al. 2013 [10]
  1. All sequence data were published in previous studies and downloaded as reads from the NCBI SRA. Coverage levels shown were estimated from numbers of raw reads before mapping to the reference genome. All samples were aligned to the polar bear reference genome, then subjected to base and map quality filtering, indel realignment, and duplicate removal