Table 6 Mean execution times, speedups and parallel efficiency (Experiment 2 - Ber.fasta - 11 GB) - SparkBLAST vs CloudBLAST - Microsoft Azure
From: SparkBLAST: scalable BLAST processing using in-memory operations
# cores | 4 | 12 | 28 | 60 | 124 | 252 |
|---|---|---|---|---|---|---|
SparkBLAST | 2,678,902.06 | 859,687.13 | 458,759.75 | 224,869.12 | 110,222.98 | 56,200.21 |
Speedup | 3.73 | 11.61 | 21.76 | 44.4 | 90.57 | 177.64 |
Efficiency | 0.93 | 0.97 | 0.78 | 0.74 | 0.73 | 0.7 |
CloudBLAST | - | - | - | - | - | - |
Speedup | - | - | - | - | - | - |
Efficiency | - | - | - | - | - | - |