Table 1 Dataset information
From: OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement
Fly | Plant | Actino | |
|---|---|---|---|
Number of taxa | 13 | 11 | 100 |
Lis of taxa | Drosophila ananassae, D. erecta, D. grimshawi, D. melanogaster, D. mojavensis, D. persimilis, D. pseudoobscur, D. sechellia, D. simulans, D. virilis, D. willistoni, D. yakuba, Lutzomyia longipalpis | Arabidopsis thaliana, Cucumis sativus, Fragaria vesca, Glycine max, Mallus domestica, Manihot esculenta, Medicago truncatula, Phaseolus vulgaris, Populus trichocarpa, Prunus persica, Vitis vinifera | See supplemental Table S1 |
Range of taxa | Genus (Drosophila) | Rosids | Phylum (Actinobacteria) |
Selected outgroup | Lutzomyia longipalpis | Vitis vinifera | Eggerthella lenta |
Number of sequences | 194,469 | 532,305 | 444,382 |
Number of AA residues | 92,515,839 | 215,684,745 | 146,754,746 |
Average sequence length | 476 | 405 | 330 |