Table 3 The running time comparison between PVAAS and ISVASE
From: ISVASE: identification of sequence variant associated with splicing event using RNA-seq data
Data | PVAAS | ISVASE(novel) | ISVASE (all) |
|---|---|---|---|
PVAAS test data | 1h38m25s | 11m22s | 13m11s |
Control1(SRR388226) | 12h5m22s | 2h27m31s | 2h52m33s |
Control2(SRR388227) | 12h52m19s | 2h29m50s | 2h53m17s |
Knockdown1(SRR388228) | 15h45m40s | 2h37m36s | 3h4m3s |
Knockdown2(SRR388229) | 16h40m40s | 2h42m27s | 3h9m38s |