From: Variant Ranker: a web-tool to rank genomic data according to functional significance
VariantRanker | eXtasy | wANNOVAR | PhenIX | wKGGSeq | ||
---|---|---|---|---|---|---|
Features | Input VCF files | x | x | x | x | x |
Input list of variants | x | - | x | - | x | |
Pedigree input | - | - | - | - | x | |
Phenotype terms (HPO/OMIM) | - | x | x | x | x | |
Result download | x | x | x | - | - | |
Excel import | x | x | x | - | - | |
Genome browser visualisation | x | - | - | x | x | |
Result web storage (shareable links) | x | - | x | - | x | |
Annotations | Gene information | x | x | x | x | x |
Population frequency | x | - | x | x | x | |
Deleteriousness prediction | x | x | x | x | x | |
Conservation scores | x | x | x | - | x | |
Clinical associations | x | - | x | x | x | |
Analysis | Variant prioritisation | x | x | x | x | x |
Variant ranking | x | x | - | x | x | |
Coding variants | x | x | x | x | x | |
Non-coding variants | x | - | x | x | x | |
Gene Ranking | x | - | x | x | - | |
Functional enrichment analysis | x | - | - | - | - | |
Graphical representation | x | - | x | - | x | |
Filtering | Genotype filtering (Case Control) | x | - | - | - | x |
Variant attributes filtering | x | - | x | - | x | |
Inheritance model | x | - | x | x | x | |
Mutation count/gene | x | - | - | - | x |