Table 2 Feature comparison with similar web-tools
From: Variant Ranker: a web-tool to rank genomic data according to functional significance
| VariantRanker | eXtasy | wANNOVAR | PhenIX | wKGGSeq | ||
|---|---|---|---|---|---|---|
| Features | Input VCF files | x | x | x | x | x |
| Input list of variants | x | - | x | - | x | |
| Pedigree input | - | - | - | - | x | |
| Phenotype terms (HPO/OMIM) | - | x | x | x | x | |
| Result download | x | x | x | - | - | |
| Excel import | x | x | x | - | - | |
| Genome browser visualisation | x | - | - | x | x | |
| Result web storage (shareable links) | x | - | x | - | x | |
| Annotations | Gene information | x | x | x | x | x |
| Population frequency | x | - | x | x | x | |
| Deleteriousness prediction | x | x | x | x | x | |
| Conservation scores | x | x | x | - | x | |
| Clinical associations | x | - | x | x | x | |
| Analysis | Variant prioritisation | x | x | x | x | x |
| Variant ranking | x | x | - | x | x | |
| Coding variants | x | x | x | x | x | |
| Non-coding variants | x | - | x | x | x | |
| Gene Ranking | x | - | x | x | - | |
| Functional enrichment analysis | x | - | - | - | - | |
| Graphical representation | x | - | x | - | x | |
| Filtering | Genotype filtering (Case Control) | x | - | - | - | x |
| Variant attributes filtering | x | - | x | - | x | |
| Inheritance model | x | - | x | x | x | |
| Mutation count/gene | x | - | - | - | x |