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Table 7 Performance comparison of various prediction methods on PDNA-62 by five-fold cross-validation

From: EL_PSSM-RT: DNA-binding residue prediction by integrating ensemble learning with PSSM Relation Transformation

Methods ACC (%) MCC SN (%) SP (%) ST (%) AUC
Dps-pred 79.10 40.30 81.80 61.10
Dbs-pssm 66.40 68.20 66.00 67.10
BindN 70.30 69.40 70.50 69.95 0.752
Dp-bind 78.10 0.49 79.20 77.20 78.20
DP-Bind 77.20 76.40 76.60 76.50
BindN-RF 78.20 78.10 78.20 78.15 0.861
BindN+ 79.00 0.44 77.30 79.30 78.30 0.859
PreDNAa 79.40 0.42 76.80 79.70 78.30
EL_PSSM-RT 80.82 0.51 85.04 80.10 82.57 0.901
  1. adenotes PreDNA without using structure features