Methods | Small | Large | Total | ||||||
---|---|---|---|---|---|---|---|---|---|
Recall | Precision | F1 | Recall | Precision | F1 | Recall | Precision | F1 | |
(a) Gavin et al. | |||||||||
MCODE | 0.058 | 0.143 | 0.083 | 0.371 | 0.411 | 0.390 | 0.311 | 0.392 | 0.347 |
RNSC | 0.184 | 0.071 | 0.102 | 0.524 | 0.393 | 0.449 | 0.487 | 0.221 | 0.304 |
DPClus | 0.165 | 0.114 | 0.135 | 0.529 | 0.331 | 0.408 | 0.495 | 0.267 | 0.347 |
CORE | 0.291 | 0.109 | 0.159 | 0.135 | 0.452 | 0.208 | 0.330 | 0.245 | 0.281 |
ClusterONE | 0.087 | 0.276 | 0.133 | 0.488 | 0.481 | 0.485 | 0.403 | 0.492 | 0.443 |
CPredictor | 0.117 | 0.212 | 0.150 | 0.506 | 0.421 | 0.459 | 0.458 | 0.437 | 0.447 |
CPredictor2.0 | 0.350 | 0.146 | 0.206 | 0.553 | 0.627 | 0.588 | 0.56 | 0.418 | 0.479 |
(b) Krogan et al. | |||||||||
MCODE | 0.039 | 0.120 | 0.059 | 0.288 | 0.511 | 0.368 | 0.234 | 0.431 | 0.304 |
RNSC | 0.408 | 0.063 | 0.110 | 0.394 | 0.390 | 0.392 | 0.549 | 0.147 | 0.233 |
DPClus | 0.369 | 0.074 | 0.123 | 0.418 | 0.352 | 0.382 | 0.549 | 0.169 | 0.258 |
CORE | 0.456 | 0.088 | 0.147 | 0.047 | 0.250 | 0.079 | 0.377 | 0.165 | 0.229 |
ClusterONE | 0.184 | 0.088 | 0.119 | 0.441 | 0.132 | 0.203 | 0.495 | 0.176 | 0.259 |
CPredictor | 0.233 | 0.132 | 0.169 | 0.453 | 0.425 | 0.438 | 0.513 | 0.338 | 0.407 |
CPredictor2.0 | 0.417 | 0.158 | 0.229 | 0.488 | 0.610 | 0.543 | 0.604 | 0.391 | 0.475 |
(c) Collins et al. | |||||||||
MCODE | 0.058 | 0.139 | 0.082 | 0.459 | 0.560 | 0.504 | 0.388 | 0.532 | 0.449 |
RNSC | 0.398 | 0.139 | 0.206 | 0.471 | 0.533 | 0.500 | 0.590 | 0.298 | 0.396 |
DPClus | 0.350 | 0.146 | 0.206 | 0.512 | 0.440 | 0.473 | 0.579 | 0.313 | 0.407 |
CORE | 0.388 | 0.141 | 0.206 | 0.247 | 0.605 | 0.351 | 0.451 | 0.298 | 0.358 |
ClusterONE | 0.350 | 0.187 | 0.244 | 0.553 | 0.431 | 0.484 | 0.586 | 0.346 | 0.435 |
CPredictor | 0.272 | 0.212 | 0.238 | 0.524 | 0.509 | 0.516 | 0.546 | 0.430 | 0.481 |
CPredictor2.0 | 0.427 | 0.200 | 0.272 | 0.588 | 0.665 | 0.624 | 0.634 | 0.466 | 0.537 |