From: Inferring transposons activity chronology by TRANScendence – TEs database and de-novo mining tool
No. Families | Mean | Noise | No. Edges | Original order | quasi-topological | hillClimbing |
---|---|---|---|---|---|---|
200 | 50 | 25% | 4608 | 763 | 943 | 743 |
200 | 50 | 50% | 6137 | 1502 | 1763 | 1444 |
200 | 100 | 50% | 18289 | 4514 | 5266 | 4521 |
300 | 100 | 15% | 21026 | 2437 | 3242 | 2480 |
300 | 100 | 25% | 24255 | 4063 | 5073 | 4102 |
300 | 100 | 50% | 32323 | 8086 | 9184 | 8075 |
500 | 200 | 15% | 98521 | 11324 | 13876 | 11534 |