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Table 2 An example of candidate normalized disease names for the mention “C7 defects”

From: A method for named entity normalization in biomedical articles: application to diseases and plants

 

Ranks

Candidate names

Cosine

   

similarity

1

COMPLEMENT_COMPONENT_7_DEFICIENCY

0.559244

2

complement_compon_7_defici

0.554464

3

c7_defici

0.549911

4

complement_component_7_deficiency

0.540654

5

C7_DEFICIENCY

0.533657

6

c7_deficiency

0.525014

 

7

antibodi_defici_syndrom

0.510718

 

8

Immunologic_Deficiency_Syndromes

0.499981

 

9

immunolog_defici_syndrom

0.492753

10

c7d

0.491925

  1. The concept id of “C7 defects” is “OMIM:610102”, and the asterisk mark () in the first column indicates that candidate names belong to “OMIM:610102”