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Table 2 The information of IGRs encoding a putative sRNAs that are differentially expressed in ΔRNase III compared to the wild type

From: Identification of streptococcal small RNAs that are putative targets of RNase III through bioinformatics analysis of RNA sequencing data

TSS #

Left Gene (Direction)

Right Gene (Direction)

Sequencea

TSS333

L897_03295 (←)

L897_03295 (→)

ATCTCAGATTAAATTATACCAAAAATGTGAAGCTAATGCTTGTTGTAAGTTCAAATTTAGTAGGATTTTTTATCAGATTTTGTTATAATAAAAACTATGAATAAACTCTATATTGATTCTTTTGTCGAAAAGAAGCTGACAGCAGGGGTACAATTATTAGATGA

TSS516

L897_04905 (→)

L897_04905 (←)

GACTTTCTTTTAAACTATGACACACTATAGTTTAAAAGAAAGTTTTTTTCAGTGTTCATAGTAAATAAAAAAACCGTCTTCCATCAAATAGAAGCGGTTTATCAAATTAACACCAAACCTTAATGCTGTAAGAACCAAGATATAACATCTTTTCCAAAAATAAATAAATAACTGTAGCCGAT

TSS332

L897_03290 (→)

L897_03290 (←)

ACCTAGAAAATAACTTTTTATTACCTATAGAAAGTTATAAAGAAACAAAAATGAAGGAGACGATGGACGTCTTCTTTTTATTATACTCAATATAATAAAAAGAAGTTTCCCATGTTTTATTACCAGTAATGTGGGATATTTAGATGGTAGCAAGAAGTTTTATAGTTGATTTGTTTTCTTTAGGTCTAATTAGCATATTTTGATTACTGATAAACTTGAATATCGCCAATAAAAAAGAAGCAAAATTATTATTTTGCTTCTAGTCAGATCATTAAATTGATTATTCTCTATTTTTGGTGTTATCCTCTTTTAGTTCAGAAGTTGCCGCGTCAGCTTCTACGGGAT

TSS795

L897_07905 (←)

L897_07905 (→)

CCACACTAAAATGAGATTAGTTAATCATGTTAAGTTTATTAAAAACTTCGGTTTTTATGAAGTCAAGTTTTTAGAGAGTTTTTAGACCATCTTTTACGATACCTTTTGCTTTAACCTCTTTTATGGTATCATATTTTATATAAAGAAAAGGAGAAAAATATGTCCGCCAAGAAAACTTTTTTTGCAAGTAATTTAAAGTACCTTAGATTAAAAAAGAACATGG

TSS181

L897_01895 (→)

L897_01895 (←)

AAGCTCTCGTGTCCCCTATCACATGCATAGGATCAGTGCACTCGACCTTTCAAGACAAGCAAGCATCAGCTCTTGCTTGTCTTTTTTTGGCCTCAAAGCCCGTTAGTCTGCTGCTATGCGAGGCTTTTTTTGAGCATCAGAACGTCAAAAAAAAGGACATGGAGTCCTTTTTTGGTGATCGGTGTTGAGGCCGTCACAAACTGCCCTTGAAATACGCTTCTATGTGGAGCTTTTTTTGGTCCTGTGACACGTAAGCTCC

TSS520

L897_04925 (←)

L897_04925 (←)

CAATTTGCTTAGCAAGTATACTATATTTAAATAATAATTCAACTATAATTTTAAAAAAACACAAAAAAAACATTATACAGCTATAAAGCTTAATATAATAGGATTTTATGTATACAATTATTTAACAGCATCTATTCAAGATCGCCTACTTCATCAGGTTGGTATGACTAAGTTTTTAACTTATCTTCCCCCCTTTTTTTGTTTTAGAAGATAAAAGAATTTTCTTGATTTTGCACACAAAAAACCGCCCTCAACTAAGAGAGCGGTTGGTTTTTTATTTAAGGAGACAGTGACT

  1. aitalics denote predicted terminator regions