Table 1 Structures and cryo-EM density maps used for evaluation of FragFit
From: A fragment based method for modeling of protein segments into cryo-EM density maps
EMDB-entry code | PDB-entry codes | Biological system | Resolution in Ã… | Citation |
|---|---|---|---|---|
1721 | 3J59,3J5A | 70S ribosome | 12.0 | (Bock et al., [28]) |
1798 | 2XSY,2XTG | 70S ribosome | 7.8 | (Ratje et al., [31]) |
2490 | 4CE4 | Mitochondrial large ribosomal subunit | 4.9 | (Greber et al., [29]) |
2566 | 3J6B | Mitochondrial large ribosomal subunit | 3.2 | (Amunts et al., [7]) |
5256 | 3IZX | cytoplasmic polyhedrosis virus | 3.1 | (Yu et al., [32]) |
2325 | 3ZPZ | GroEL/ES | 8.9 | (Chen et al., [33]) |
5776 | 3J5Q | TRPV1 | 3.8 | (Cao et al., [8]) |
1733 | 3C91 | 20S proteasome | 6.8 | (Rabl et al., [30]) |