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Table 2 GSEA result for the example dataset

From: ADAGE signature analysis: differential expression analysis with data-defined gene sets

  1. Adjusted p-values were rounded off to three decimal digits. Pathways significantly enriched (FDR q-val < = 0.05) are highlighted by stars. Pathways detected both by ADAGE signature analysis (Table 1) and GSEA are colored correspondingly
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BMC Bioinformatics

ISSN: 1471-2105

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