From: GPU-based detection of protein cavities using Gaussian surfaces
GaussianFinder | ConCavity | POCASA | SURFNET | PASS | GHECOM | Fpocket | 3V | KVFinder | |
---|---|---|---|---|---|---|---|---|---|
d∈[0.0,1.0] | 7100 | 1512 | 2310 | 1737 | 4915 | 4562 | 5869 | 3751 | 4578 |
d∈]1.0,2.0] | 188 | 107 | 176 | 1227 | 884 | 255 | 195 | 417 | 476 |
d∈]2.0,3.0] | 227 | 127 | 226 | 520 | 117 | 380 | 207 | 291 | 305 |
d∈]3.0,4.0] | 182 | 203 | 297 | 432 | 157 | 413 | 257 | 148 | 193 |
TP | 7697 | 1949 | 3009 | 3014 | 6073 | 5610 | 6528 | 4607 | 5552 |
FP | 1033 | 2103 | 863 | 902 | 325 | 581 | 878 | 1017 | 979 |
TN | 2045 | 860 | 1697 | 1247 | 3086 | 2540 | 2827 | 1782 | 1889 |
FN | 393 | 207 | 289 | 216 | 44 | 500 | 148 | 428 | 467 |
S v | 0.951 | 0.904 | 0.912 | 0.933 | 0.993 | 0.918 | 0.978 | 0.915 | 0.922 |
S c | 0.664 | 0.290 | 0.663 | 0.580 | 0.905 | 0.814 | 0.763 | 0.636 | 0.659 |
a | 0.872 | 0.549 | 0.803 | 0.792 | 0.961 | 0.883 | 0.901 | 0.815 | 0.837 |
r d | 0.944 | 0.239 | 0.369 | 0.369 | 0.745 | 0.688 | 0.801 | 0.565 | 0.681 |
C u | 453 | 6201 | 5141 | 5136 | 2077 | 2540 | 1622 | 3543 | 2598 |