Table 1 Running time of GAM-NGS, Metassembler, and CAMSA on scaffold assemblies produced by ScaffMatch, SOAPdenovo2, SGA, and SSPACE on three GAGE datasets
From: CAMSA: a tool for comparative analysis and merging of scaffold assemblies
| Â | S. aureus | R. sphaeroides | H. sapiens Chr14 |
|---|---|---|---|
GAM-NGS | 4m25s (+2m3s) | 8m47s (+4m14s) | 1h29m (+43m) |
Metassembler | 59m16s (+0s) | 1h48m53s (+0s) | 8h19m10s (+0s) |
CAMSA | 2s (+3s) | 2s (+10s) | 48s (+59m) |
CAMSA(+GM) | 2s (+3s) | 2s (+10s) | 54s (+1h10m) |