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Fig. 1 | BMC Bioinformatics

Fig. 1

From: ClusterTAD: an unsupervised machine learning approach to detecting topologically associated domains of chromosomes from Hi-C data

Fig. 1

Chromosome contact matrix, TADs, and the workflow of ClusterTAD. a The contact matrix of Chromosome 20 of the human embryonic stem cell (hESC). The x and y-axes represent the regions of the chromosome. b Representation of TADs along the main diagonal of a heat map visualizing a 100 × 100 chromosomal contact matrix at 40 KB resolution. The intensity of colors represents the value of interaction frequency in the matrix. The blue squares along the main diagonal denote the identified TADs in the contact matrix. c The workflow of ClusterTAD

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BMC Bioinformatics

ISSN: 1471-2105

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