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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Decontaminating eukaryotic genome assemblies with machine learning

Fig. 2

The top 20 organisms identified in BLAST analysis of the empirical genome sequences for (a) C. remanei (b) C. latens (c) A. vaga. For C. remanei the most common BLAST hit was C. remanei, followed by two likely contaminants and scaffolds that could not be assigned origin with BLAST. For C. latens the most common BLAST hit was the microbial contaminant S. matophilia followed by C. remanei, a second contaminant P. protegens, and scaffolds that could not be assigned origin. For A. vaga the majority of scaffolds could not be assigned origin with BLAST, likely due to the low number of rotifer sequences in public databases

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