CONSTAX: a tool for improved taxonomic resolution of environmental fungal ITS sequences

BMC Bioinformatics

Table 2 Sample origins, barcode regions, and accession numbers for datasets

Dataset	Gene Region	Read Type	Sample Origin	Data Availability	Reference
ITS1-Soil	ITS1	2 × 250 bp	North American soil	NCBI SRA SRP035367	Smith & Peay [36]
ITS2-Soil	ITS2	2 × 250 bp	North American soil	NCBI SRA SRR1508275	Oliver et al. [37]
ITS1-Plant	ITS1	2 × 250 bp	European plants	MG-RAST 13322	Agler et al. [10]
ITS2-Plant	ITS2	2 × 250 bp	European plants	MG-RAST 13322	Agler et al. [10]
ITS1-BC^a	ITS1	1 × 300 bp	North American soil	NCBI SRA SRP079401	Benucci et al., unpublished
ITS2-BC^a	ITS2	1 × 300 bp	North American soil	NCBI SRA SRP079401	Benucci et al., unpublished
ITS1-UN^b	ITS1	1 × 300 bp	North American soil	NCBI SRA SRP079401	Benucci et al., unpublished
ITS2-UN^b	ITS2	1 × 300 bp	North American soil	NCBI SRA SRP079401	Benucci et al., unpublished

ISSN: 1471-2105