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Table 2 Sample origins, barcode regions, and accession numbers for datasets

From: CONSTAX: a tool for improved taxonomic resolution of environmental fungal ITS sequences

Dataset Gene Region Read Type Sample Origin Data Availability Reference
ITS1-Soil ITS1 2 × 250 bp North American soil NCBI SRA SRP035367 Smith & Peay [36]
ITS2-Soil ITS2 2 × 250 bp North American soil NCBI SRA SRR1508275 Oliver et al. [37]
ITS1-Plant ITS1 2 × 250 bp European plants MG-RAST 13322 Agler et al. [10]
ITS2-Plant ITS2 2 × 250 bp European plants MG-RAST 13322 Agler et al. [10]
ITS1-BCa ITS1 1 × 300 bp North American soil NCBI SRA SRP079401 Benucci et al., unpublished
ITS2-BCa ITS2 1 × 300 bp North American soil NCBI SRA SRP079401 Benucci et al., unpublished
ITS1-UNb ITS1 1 × 300 bp North American soil NCBI SRA SRP079401 Benucci et al., unpublished
ITS2-UNb ITS2 1 × 300 bp North American soil NCBI SRA SRP079401 Benucci et al., unpublished
  1. a data processed with UPARSE algorithm, OTUs generated with clustering
  2. b data processed with UNOISE algorithm, ESVs generated with splitting