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Table 2 F1-Score comparison between CoMet and other contig coverage and/or composition based binning methods

From: CoMet: a workflow using contig coverage and composition for binning a metagenomic sample with high precision

Dataset

Metawatt

MaxBin

MyCC (default)

MyCC (coverage)

CoMet

sim10_1

91.58 (4)

94.91 (3)

97.47 (1)

96.09 (2)

89.28 (5)

sim10_20x

70.5 (5)

98.16 (1)

83.46 (4)

88.35 (3)

96.7 (2)

sim10_80x

75.21 (5)

95.61 (3)

98.55 (2)

98.64 (1)

88.56 (4)

sim30_CAMI

60.55 (5)

75.58 (4)

80.93 (2)

80.93 (2)

82.71 (1)

  1. Binning methods are ranked based on their F1-score with different datasets with their rank given in parentheses. Bold values indicate the highest of the F1-scores