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Table 5 Statistics on two genomes comparisons

From: SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data

Measure

Without frame separation

6 distinct reading frames

Symbol-resolved(option set B1)

Gross (option set B2)

Symbol-resolved (option set B3)

Gross (option set B4)

GenBank total gene length

2,360,518

2,367,915

2,367,915

2,367,915

RefSeq total gene length

2,336,204

2,339,349

2,339,345

2,339,349

Symbol-wise ACC

0.9861

–

0.9967

–

Symbol-wise F1

0.9923

0.9923

0.9892

0.9892

Site-wise F1

0.9779

0.9779

0.9751

0.9751

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BMC Bioinformatics

ISSN: 1471-2105

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