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Table 2 LocText found novel GO annotations in latest publications; extrinsic evaluation

From: LocText: relation extraction of protein localizations to assist database curation

Org. # C C&NR C&NT C&NR,NT
Human 20 13 (65%) 10 (50%) 9 (45%) 7 (35%)
Yest 20 17 (85%) 12 (60%) 6 (30%) 4 (20%)
Cress 20 16 (80%) 11 (55%) 9 (45%) 7 (35%)
Total 60 46 (77%) 33 (55%) 24 (40%) 18 (30%)
  1. LocText mined protein location relations not tagged in Swiss-Prot in latest publications: 2012-2017 for (column Org.=organism) human and 1990-2017 for yeast and cress. (#) 60 novel text-mined annotations (20 for each organism) were manually verified: (C=correct) 77% were correct; 55% were correct and had no relation (NR) in Swiss-Prot; 40% were correct and were not in text (NT) descriptions of Swiss-Prot; 30% were correct and neither had a relation nor appeared in text descriptions