Fig. 6

Comparison of gene ontology (GO) enriched terms in C. briggsae synteny breaks between C. elegans vs. C. briggsae and 100 replicates of C. elegans vs. 100 kb fragmented C. briggsae. Top ranks of GO terms in the original comparison are shown in the Y axis. For original top ranking GO terms, only those that appeared more than 10 times in top 10 ranks of after-fragmentation comparison replicates were displayed (see Additional file 7: Table S2 for more details). The X axis shows top 10 ranks and rank “out of top 10” in the comparison when assemblies were fragmented. The darkness of color is proportional to the occurrence of the GO term in that rank within 100 replicates. Regions in red are indications of occurred ranking errors. All GO categories have adjusted p-value < 0.01