Table 1 Explanation of all individual techniques used to predict drug AUC. Methods utilizing Residuals predict the sample-mean centered sensitivities (actual AUC- mean AUC) instead of the AUC directly
From: Investigation of model stacking for drug sensitivity prediction
Method | Description |
|---|---|
Mean | Prediction using the mean AUC of each drug |
KNN Direct | K Nearest Neighbor (KNN) Approach using the actual AUC with drug target data |
KNN Residual | KNN using the residuals with drug target data |
NN GE | Neural Network on Gene Expressions |
NN Phy Direct | Neural Network on Chemical Descriptors of drugs |
RF Phy Residual | Random Forest on Chemical Descriptors of drugs using the residuals |
RF GE | Random Forest on Gene expression |