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Fig. 8 | BMC Bioinformatics

Fig. 8

From: Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory

Fig. 8

Visualization of E. coli tRNA (Phe) Boltzmann space with and without SHAPE data. Nucleotides are arranged around the edge of a circle and basepairs are drawn as chords connecting the paired bases. MIBPs that are constrained to be present are highlighted in red. Those that are absent are highlighted in blue. The darkness of a plotted basepair is proportional to its probability. The native structure forms a clover-leaf shape as in the left most cluster and the cluster with SHAPE data

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BMC Bioinformatics

ISSN: 1471-2105

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