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Table 1 Average number of rejections and false positives across 200 simulated datasets for the proposed HMTM method, top-down procedure, and global-up procedure. R denotes # of rejections; V denotes # of false positives

From: A hidden Markov tree model for testing multiple hypotheses corresponding to Gene Ontology gene sets

 

HMTM

 

Top-down

 

Global-up

Setting

R

V

 

R

V

 

R

V

1

2515

1.2

 

1077

0.005

 

1061

0.01

2

2538

28.4

 

75

0.01

 

595

0.005