Fig. 11
From: Comparative assessment of strategies to identify similar ligand-binding pockets in proteins
Violin plots assessing the performance of ligand docking algorithms on the TOUGH-M1 dataset. The accuracy of binding modes predicted by Vina and rDock are evaluated against experimental structures with (a) the root-mean-square deviation, RMSD, and (b) the Contact Mode Score, CMS. Boxes on the top of violins end at quartiles Q1 and Q3, and a horizontal line in each box is the median. Whiskers point at the farthest points that are within 1.5 of the interquartile range