Table 1 Samples of Saccharomyces cerevisiae and Phytophthora infestans used to evaluate and benchmark nQuire
From: nQuire: a statistical framework for ploidy estimation using next generation sequencing
Sample | Ploidy | Species | Cov.a | ΔlogL2n | ΔlogL3n | ΔlogL4n |
|---|---|---|---|---|---|---|
CBS7837 | 2n | S. cerev. | 116 | 6319 | 35721 | 23033 |
CBS2919 | 3n | S. cerev. | 111 | 33614 | 920 | 29347 |
CBS9564 | 4n | S. cerev. | 101 | 37003 | 22971 | 6429 |
99189 | 2n | P. infes. | 210 | 119218 | 369682 | 293194 |
88069 | 3n | P. infes. | 368 | 599933 | 42717 | 390002 |