Test | nSig | nValidation | nTV | pTV(%) | nFV | pFV(%) |
|---|
JointLRT | 4556 | 2213 | 1705 | 77.0 | 508 | 23.0 |
KS | 1288 | 60 | 47 | 78.3 | 13 | 21.7 |
AW | 1850 | 262 | 220 | 84.0 | 42 | 16.0 |
iAW.Lev | 2041 | 747 | 666 | 89.2 | 81 | 10.8 |
iAW.BF | 1843 | 339 | 296 | 87.3 | 43 | 12.7 |
iAW.TM | 1838 | 387 | 342 | 88.4 | 45 | 11.6 |
- nSig: the number of significant CpG sites detected in GSE37020 based on FDR adjusted p-value < 0.05;
- nValidation: the number of validated CpG sites in GSE20080 based on unadjusted p-value < 0.05;
- nTV: the number of truly validated CpG sites with the same difference directions in means and variances between the two groups;
- pTV: \(=\frac {nTV}{nValidation}\), the proportion of significant CpG sites detected in GSE37020 and truly validated in GSE20080;
- nFV: the number of falsely validated CpG sites in GSE20080 with inconsistent difference direction in means or variances between the two groups;
- pFV: \(=\frac {nFV}{nValidation}\), the proportion of significant CpG sites detected in GSE37020 but falsely validated in GSE20080
