Table 4 Number of SNP pairs with FDR<0.05 for each method (diagonal) and overlap between the pairs detected between two methods (off diagonal)
From: Performance of epistasis detection methods in semi-simulated GWAS
| Â | GBOOST | IndOR | fastepi | DSS | SHEsisEpi |
|---|---|---|---|---|---|
GBOOST | 230 | 143 | 6 | 0 | 0 |
IndOR | 143 | 446 | 2 | 0 | 0 |
fastepi | 6 | 2 | 9 | 0 | 0 |
DSS | 0 | 0 | 0 | 119 | 0 |
SHEsisEpi | 0 | 0 | 0 | 0 | 0 |