Table 7 Comparison of classifier accuracy by TSP and AUCTSP for decreasing size of training set
From: AUCTSP: an improved biomarker gene pair class predictor
Test set fraction | OVARIAN | LEUKEMIA | COLON | BREAST-LN | BREAST-ER | DLBCL | DLBCL-FL | PROSTATE | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | TSP | AUCTSP | |
1% | 87.18 | 93.39 | 97.89 | 97.89 | 88.98 | 96.59 | 89.76 | 94.66 | 84.26 | 91.07 | 78.50 | 78.88 | 95.80 | 99.30 | 91.90 | 91.90 |
5% | 87.48 | 89.43 | 96.02 | 96.12 | 84.45 | 92.45 | 86.03 | 89.35 | 75.40 | 84.11 | 78.20 | 78.50 | 91.46 | 96.23 | 90.70 | 90.50 |
10% | 77.43 | 82.78 | 91.64 | 92.27 | 76.76 | 95.01 | 89.76 | 94.66 | 84.26 | 91.06 | 77.20 | 78.02 | 83.18 | 92.49 | 81.34 | 80.37 |
15% | 76.96 | 79.7 | 88.2 | 90.9 | 72.71 | 73.02 | 77.85 | 78.6 | 65.84 | 75.07 | 72.84 | 76.73 | 83.02 | 87.57 | 79.10 | 79.50 |
20% | 70.71 | 73.95 | 84.32 | 89.1 | 61.39 | 79.15 | 86.03 | 89.35 | 75.39 | 84.10 | 69.23 | 75.35 | 71.30 | 75.45 | 68.70 | 76.06 |
25% | 72.2 | 76.6 | 81.27 | 87 | 53.75 | 67.65 | 82.05 | 85.48 | 71.20 | 80.80 | 66.79 | 72.11 | 66.87 | 67.14 | 63.30 | 74.35 |
30% | 61.15 | 80.38 | 77.53 | 81.1 | 41.38 | 42.39 | 77.85 | 78.6 | 65.84 | 75.06 | 63.41 | 72.13 | 67.35 | 66.74 | 53.30 | 60.7 |