Fig. 2
From: Effective automated pipeline for 3D reconstruction of synapses based on deep learning
The workflow of our proposed method. Left to right: the raw data with one synapse, shown in red circles; image registration results; synapse detection results of the faster region convolutional neural networks (R-CNN); the results of screening method using z-continuity, with positive shown in red and negative in green; synaptic cleft segmentation through GrabCut; and 3D reconstruction of the synapse