Table 11 Colon cancer data set
From: Identification of differentially expressed genes by means of outlier detection
Ns | ||||
|---|---|---|---|---|
12 | 49 | 59 | ||
I | ORdensity (A) | 88.71 | 90.32 | 90.32 |
limma (B) | 91.94 | 88.71 | 88.71 | |
SAM (C) | 85.48 | 88.71 | 88.71 | |
II | A vs B | 7 | 32 | 38 |
A vs C | 0 | 14 | 22 | |
B vs C | 2 | 26 | 29 | |
III | ORdensity | 7.5 (1.27) | 35.4 (4.09) | 43.0 (3.56) |
limma | 0.1 (0.32) | 3.5 (0.85) | 4.1 (0.57) | |
SAM | 1.8 (1.14) | 23.7 (2.98) | 29.4 (3.57) | |
Ns | ||||
166 | 186 | 366 | ||
I | ORdensity (A) | 87.10 | 87.10 | - |
limma (B) | 87.10 | 87.10 | 87.10 | |
SAM (C) | 87.10 | - | - | |
II | A vs B | 119 | 134 | - |
A vs C | 118 | - | - | |
B vs C | 155 | - | - | |
III | ORdensity | 127.2 (4.49) | 142.5 (4.84) | - |
limma | 13.1 (1.37) | 16.7 (2.21) | 72.1 (4.72) | |
SAM | 136.7 (5.23) | - | - | |