Table 4 Simulation study 1, scenario 1 with nX=nY=30 and 100 runs
From: Identification of differentially expressed genes by means of outlier detection
Δ | DE | 10f0 | C i | \(\bar {n}_{i}\) | \(\overline {OR}\) | \(\overline {FP}\) | \(\overline {dFP}\) | \(\overline {FPC}\) |
|---|---|---|---|---|---|---|---|---|
(sd) | (sd) | (sd) | (sd) | (sd) | ||||
\(C_{{1}^{*}}\) | 30.7 | 45.7 | 0.5 | 0.4 | 0.2 | |||
(7.9) | (6.7) | (0.3) | (0.3) | (0.9) | ||||
50 | 8.5 | \(C_{{2}^{*}}\) | 21.8 | 19.4 | 5.4 | 7.5 | 20.7 | |
(5.9) | (5.0) | (2.1) | (4.4) | (20.9) | ||||
C 3 | 32.9 | 8.4 | 9.2 | 29.0 | 93.7 | |||
(6.3) | (0.6) | (0.2) | (3.0) | (5.8) | ||||
\(C_{1}^{*}\) | 34.1 | 46.5 | 0.0 | 0.0 | 0.0 | |||
(11.3) | (6.3) | (0.1) | (0.1) | (0.2) | ||||
1.5 | 100 | 8.5 | \(C_{2}^{*}\) | 56.2 | 22.5 | 1.5 | 1.8 | 1.6 |
(10.3) | (2.7) | (0.67) | (9.0) | (2.0) | ||||
C 3 | 32.1 | 9.1 | 8.7 | 21.5 | 68.9 | |||
(5.6) | (0.5) | (0.35) | (2.0) | (8.9) | ||||
\(C_{1}^{*}\) | 59.3 | 29.5 | 0.0 | 0.0 | 0.0 | |||
(12.5) | (2.8) | (0.0) | (0.0) | (0) | ||||
200 | 8.5 | \(C_{2}^{*}\) | 113.0 | 14.8 | 0.5 | 0.8 | 0.4 | |
(13.0) | (1.0) | (0.2) | (0.2) | (0.6) | ||||
C 3 | 25.3 | 8.0 | 6.0 | 9.9 | 14.9 | |||
(6.5) | (0.5) | (0.9) | (1.8) | (8.2) | ||||
\(C_{1}^{*}\) | 22.3 | 86.3 | 0.0 | 0.0 | 0.0 | |||
(9.2) | (17.1) | (0.1) | (0.0) | (0) | ||||
50 | 8.0 | \(C_{2}^{*}\) | 27.8 | 42.0 | 1.4 | 1.5 | 5.8 | |
(6.9) | (9.2) | (2.0) | (3.3) | (18.0) | ||||
C 3 | 36.0 | 9.1 | 9.2 | 27.8 | 97.0 | |||
(5.3) | (0.61) | (0.19) | (2.0) | (2.7) | ||||
\(C_{1}^{*}\) | 35.5 | 74.7 | 0.0 | 0.0 | 0.0 | |||
(7.9) | (8.1) | (0.0) | (0.0) | (0) | ||||
2 | 100 | 8.0 | \(C_{2}^{*}\) | 63.1 | 37.3 | 0.4 | 0.4 | 0.3 |
(7.9) | (3.1) | (0.2) | (0.2) | (0.7) | ||||
C 3 | 26.0 | 8.8 | 9.3 | 24.9 | 93.7 | |||
(4.7) | (0.6) | (0.3) | (1.9) | (4.5) | ||||
\(C_{1}^{*}\) | 69.2 | 46.6 | 0.0 | 0.0 | 0.0 | |||
(14.1) | (3.9) | (0.0) | (0.0) | (0) | ||||
200 | 8.0 | \(C_{2}^{*}\) | 122.9 | 23.8 | 0.2 | 0.2 | 0.0 | |
(17.0) | (2.4) | (0.1) | (0.1) | (0.3) | ||||
C 3 | 13.1 | 8.9 | 8.1 | 13.0 | 58.0 | |||
(17.3) | (2.4) | (2.0) | (4.1) | (23.1) | ||||
\(C_{1}^{*}\) | 18.9 | 191.2 | 0.0 | 0.0 | 0.0 | |||
(6.6) | (22.7) | (0.0) | (0.0) | (0) | ||||
50 | 7.2 | \(C_{2}^{*}\) | 31.5 | 99.9 | 0.29 | 0.4 | 2.1 | |
(4.9) | (16.1) | (1.2) | (2.6) | (14.1) | ||||
C 3 | 37.0 | 9.0 | 9.2 | 27.7 | 99.8 | |||
(5.1) | (0.6) | (0.19) | (1.5) | (0.8) | ||||
\(C_{1}^{*}\) | 38.6 | 155.7 | 0.0 | 0.0 | 0.0 | |||
(10.0) | (15.1) | (0.0) | (0.0) | (0) | ||||
3 | 100 | 7.1 | \(C_{2}^{*}\) | 61.3 | 83.4 | 0.0 | 0.0 | 0.0 |
(10.0) | (6.6) | (0.1) | (0.0) | (0) | ||||
C 3 | 25.1 | 8.7 | 9.3 | 25.8 | 99.6 | |||
(4.5) | (0.49) | (0.26) | (1.7) | (1.1) | ||||
\(C_{1}^{*}\) | 74.1 | 95.8 | 0 | 0 | 0.0 | |||
(16.4) | (8.2) | (0) | (0) | (0) | ||||
200 | 7.1 | \(C_{2}^{*}\) | 115.5 | 53.1 | 0.0 | 0.0 | 0.0 | |
(21.3) | (6.6) | (0.0) | (0.0) | (0) | ||||
C 3 | 16.1 | 12.5 | 8.3 | 16.4 | 86.0 | |||
(24.8) | (11.9) | (3.2) | (6.8) | (33.6) |