Table 1 Top 3 significant associations between factors in mouse and human cell types
From: Insights into mammalian transcription control by systematic analysis of ChIP sequencing data
Cell type | Combination 1 | Combination 2 | Combination 3 |
|---|---|---|---|
B cells (M) | E2A, FoxO1, Pax5 | E2A, Ebf1, Oct2 | Pax5, Smad3, FoxO1A |
T cells (M) | Stat3, Stat4, Stat5, Stat6 | Stat5a, Stat5b, Stat5 | Fli1, Gata3 |
Dendritic cells (M) | Hif1a, Irf1, Maff, Relb, Stat3, Rel, Irf2Irf4 | Hif1a, Irf1, Maff, Relb, Rel, Irf2Irf4 | - |
Macrophages (M) | CEBPA, CEBPB | CEBPA, CEBPB, PU1, STAT1 | CEBPA, CEBPB, PPARG, PU1, STAT1 |
Erythroid cells (M) | ETO2, GATA1, LDB1, MTGR1, SCL | GATA1, LDB1, MTGR1, SCL | - |
MK progenitors (M) | CBFB, GATA1, GATA2, RING1B, RUNX1 | CBFB, ETS1, RING1B, RUNX1 | - |
MEL (M) | JunD, SMC3 | GATA1, SCL | CMYC, MAX, MXI1, NELFE, SCL, TBP |
ES cells (M) | Suz12, SOX2 | E2F1, nMYC | E2F1, KLF4, nMYC |
A549 (H) | HDAC6, P300, ELF1, ETS1, GABP | ATF3, BRF1 | RNA polII, CTCFL |
GM12878 (H) | SAP30, TAF7 | STAT5A, BRG1 | P300, ETS1 |
H1-hESC (H) | RAD21, ZNF143 | BACH1, MAFK | USF1, USF2 |
HeLa-S3 (H) | EZH2, RNA polII, SIN3A, CJUN, CMYC | GTF2B, NR2F2 | RNAPII, RBBP5 |
HepG2 (H) | TAF1, TAF7, TEAD4 | SAP30, ATF1, ATF3 | PU1, STAT5A |
K562 (H) | GTF2F1, CTCF | HDAC1, CJUN | E2F6, CTCF |