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Table 4 Functional homogeneity of mesoscale modules detected by Louvain algorithm, evaluated using three ontologies: MF, BP, and CC

From: Functional homogeneity and specificity of topological modules in human proteome

PPIN MF BP CC
max mean std max mean std max mean std
Physical Binary 0.81 0.79 0.01 0.85 0.59 0.24 0.78 0.75 0.04
Weighted 0.83 0.80 0.02 0.75 0.42 0.31 0.80 0.77 0.01
Functional Binary 0.71 0.64 0.12 0.72 0.57 0.25 0.8 0.72 0.25
Weighted 0.71 0.42 0.22 0.74 0.60 0.25 0.8 0.76 0.07
Combined Binary 0.74 0.73 0.01 0.70 0.58 0.25 0.77 0.75 0.01
Weighted 0.73 0.72 0.002 0.72 0.45 0.29 0.76 0.75 0.01