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Table 1 MAQC and SEQC project data used for Shambhala validation

From: Shambhala: a platform-agnostic data harmonizer for gene expression data

Project GEO reference Platform name Platform GEO ID Number of samples
MAQC GSE5350 Agilent-012391 Whole Human Genome Oligo Microarray G4112A () GPL1708 59
MAQC GSE5350 Affymetrix Human Genome U133 Plus 2.0 Array GPL570 59
MAQC GSE5350 Illumina Sentrix Human-6 Expression Beadchip GPL2507 59
SEQC GSE47792 Illumina HiSeq 2000 GPL11154 1324
SEQC GSE56457 Illumina HumanHT-12 V4.0 expression beadchip GPL10558 24
SEQC GSE56457 Affymetrix Human Gene 2.0 ST Array GPL17930 16
SEQC GSE56457 Affymetrix GeneChip® PrimeView™ Human Gene Expression Array GPL16043 16