Table 3 Function enrichment analysis of predicted protein complexes detected on Krogan dataset
No. | Gene Ontology term | p-value | Cluster frequency | Genes annotated to the term |
|---|---|---|---|---|
1 | intra-Golgi vesicle-mediated transport | 1.91e-16 | 100.0% | COG3/YER157W, COG7/YGL005C, COG1/YGL223C, COG2/YGR120C, COG8/YML071C, COG6/YNL041C, COG4/YPR105C |
2 | polyadenylation-dependent snoRNA 3’-end processing | 3.32e-18 | 100.0% | RRP43/YCR035C, RRP45/YDR280W, MTR3/YGR158C, SKI6/YGR195W, LRP1/YHR081W, RRP40/YOL142W, RRP6/YOR001W |
3 | exonucleolytic trimming involved in rRNA processing | 5.02e-20 | 100.0% | RRP43/YCR035C, RRP42/YDL111C, RRP45/YDR280W, MTR3/YGR158C, SKI6/YGR195W, RRP4/YHR069C, LRP1/YHR081W, CSL4/YNL232W |
4 | negative regulation of gluconeogenesis | 3.00e-17 | 100.0% | GID7/YCL039W, RMD5/YDR255C, VID30/YGL227W, VID28/YIL017C, FYV10/YIL097W, GID8/YMR135C |
5 | chromatin disassembly | 3.83e-20 | 100.0% | HTL1/YCR020W-B, RSC6/YCR052W, RTT102/YGR275W, STH1/YIL126W, RSC58/YLR033W, SFH1/YLR321C, RSC2/YLR357W, NPL6/YMR091C |
6 | positive regulation of transcription from RNA polymerase I promoter | 5.96e-16 | 87.5% | UTP4/YDR324C, UTP5/YDR398W, UTP8/YGR128C, UTP9/YHR196W, UTP10/YJL109C, UTP15/YMR093W, NAN1/YPL126W |