Table 3 The results of four different encoding schemes in the 10-fold cross-validation
From: DeepUbi: a deep learning framework for prediction of ubiquitination sites in proteins
Features | Acc (%) | Sn (%) | Sp (%) | AUC | MCC |
|---|---|---|---|---|---|
One-Hot | 89.58 | 87.65 | 91.65 | 0.8905 | 0.79 |
One-Hot + CKSAAP | 88.98 | 89.80 | 88.10 | 0.9066 | 0.78 |
One-Hot + PseAAC | 86.05 | 87.58 | 84.41 | 0.8847 | 0.72 |
One-Hot + IPCP | 86.41 | 83.44 | 89.61 | 0.8932 | 0.73 |