Fig. 2
From: Greedy de novo motif discovery to construct motif repositories for bacterial proteomes
The workflow of de novo motif discovery approach. All FIGfams families were downloaded for a user-specified organism and get through the core of the processing -MEME and FIMO- where all the motifs are discovered and masked in an iterative process. A sqlite repository stores all the motifs and motif architectures with required information like organism name, FIGfams family name, the start and stop points on the sequence and etc