Table 5 The InterProScan results that are most commonly overlapping with a motif
From: Greedy de novo motif discovery to construct motif repositories for bacterial proteomes
Num | interpro_ac | Count | Distinct motif | Interpro description |
|---|---|---|---|---|
0 | None | 58604 | 11996 | None |
1 | IPR003439 | 9652 | 402 | ABC transporter-like |
2 | IPR027417 | 6384 | 1187 | P-loop containing nucleoside triphosphate hydr... |
3 | IPR003593 | 5060 | 446 | AAA+ ATPase domain |
4 | IPR017871 | 1683 | 49 | ABC transporter, conserved site |
5 | IPR000515 | 1131 | 178 | ABC transporter type 1, transmembrane domain M... |
6 | IPR035906 | 835 | 204 | MetI-like superfamily |
7 | IPR001789 | 750 | 62 | Signal transduction response regulator, receiv... |
8 | IPR030679 | 498 | 155 | ABC-type amino acid transport system, ATPase c... |
9 | IPR036188 | 392 | 153 | FAD/NAD(P)-binding domain superfamily |
10 | IPR005670 | 356 | 98 | Phosphate transport system permease protein 1 |
11 | IPR036388 | 323 | 191 | Winged helix-like DNA-binding domain superfamily |
12 | IPR036890 | 318 | 110 | Histidine kinase/HSP90-like ATPase superfamily |
13 | IPR013785 | 316 | 274 | Aldolase-type TIM barrel |
14 | IPR000524 | 307 | 17 | Transcription regulator HTH, GntR |
15 | IPR003594 | 305 | 69 | Histidine kinase/HSP90-like ATPase |
16 | IPR000843 | 299 | 22 | LacI-type HTH domain |
17 | IPR002347 | 288 | 42 | Short-chain dehydrogenase/reductase SDR |
18 | IPR036291 | 276 | 177 | NAD(P)-binding domain superfamily |
19 | IPR000795 | 269 | 45 | Transcription factor, GTP-binding domain |
20 | IPR017853 | 263 | 169 | Glycoside hydrolase superfamily |
21 | IPR001650 | 237 | 68 | Helicase, C-terminal |
22 | IPR014001 | 230 | 95 | Helicase superfamily 1/2, ATP-binding domain |
23 | IPR029063 | 230 | 205 | S-adenosyl-L-methionine-dependent methyltransf... |
24 | IPR001360 | 227 | 47 | Glycoside hydrolase family 1 |
25 | IPR036390 | 214 | 113 | Winged helix DNA-binding domain superfamily |
26 | IPR006047 | 212 | 68 | Glycosyl hydrolase, family 13, catalytic domain |
27 | IPR011006 | 209 | 77 | CheY-like superfamily |
28 | IPR020846 | 206 | 92 | Major facilitator superfamily domain |
29 | IPR001638 | 202 | 48 | Solute-binding protein family 3/N-terminal do... |