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Table 1 Phase 2 Places

From: Spatial quorum sensing modelling using coloured hybrid Petri nets and simulative model checking

Place name Biological entity
Adenine Adenine
AI2_In_Phase2 AI_2 produced in phase 2 in the cell
AI_2_Out AI_2 exported into the environment
Decarb_SAM Decarboxylated S-adenosylmethionine
DPD 4,5-dihydroxy-2,3-pentamidine
Homocys homocysteine
LuxS_gene LuxS genes
LuxS_mRNA LuxS mRNA
LuxS_prot LuxS protein
Met methionine
MTA 5 -methylthioadenosine
MTR 5 -methylthioribose
Nutrients Nutrition source
pfs_gene nucleosidase Pfs genes
Pfs_mRNA nucleosidase Pfs mRNA
Pfs_prot nucleosidase Pfs protein
Putrescine putrescine
SAH S-adenosylehomocysteine
SAM S-adenosylmethionine
Spermidine Spermidine
SRH S-ribosyl homocysteine