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Table 2 Testing results of RhoTermPredict and performances of the Rho-independent terminators tool ARNolda in the positive and negative set of sequences

From: RhoTermPredict: an algorithm for predicting Rho-dependent transcription terminators based on Escherichia coli, Bacillus subtilis and Salmonella enterica databases

Tool

TP

FN

FP

TN

Precision (%)

Recall (%)

Specificity (%)

Accuracy (%)

F1-score

RhoTermPredict

128

67

46

149

73.6

65.6

76.4

71.0

0.7

ARNold

11

184

19

176

36.7

5.6

90.3

48.0

0.1

  1. aTest experiments were repeated 10 times for 195 randomly selected sequences of positive sets of E. coli K-12, and the means were taken
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BMC Bioinformatics

ISSN: 1471-2105

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