Fig. 3

Selection of plots produced in a UTAP report. a Histogram with the number of reads for each sample in the various pipeline steps. b Sequence coverage on and near gene regions using ngs.plot [13] c. Heatmap of Pearson correlation between samples according to gene expression values. d. Scatter plot of significance (y axis) versus fold-change (x axis). e Hierarchical clustering heatmap of differentially expressed genes. Plots D and E are created when DESeq2 analysis is executed