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Table 2 Performance comparison between MI-SVM and MD-SVM

From: MD-SVM: a novel SVM-based algorithm for the motif discovery of transcription factor binding sites

Transcription factor

MI-SVM

MD-SVM

Zscan10-3

0.802262

0.802638

Sox14

0.918162

0.918175

Irf2

0.966050

0.966175

Nkx2-9

0.937225

0.937575

Foxg1

0.896850

0.897000

Mlx

0.999125

0.999475

Sdccag8

0.996550

0.996575

Mecp2

0.930225

0.930125

Zfp202

0.913325

0.920475

Egr2

0.899875

0.911275

Dmrtc2

0.968725

0.966925

Pou1f1

0.997725

0.998575

Pou3f1

0.993062

0.993063

Foxo1

0.930800

0.930325

Oct1

0.989450

0.994550

Pit1

0.994875

0.994775

Foxp2

0.925825

0.926425