Skip to main content

Table 1 Performance comparison on three datasets of different scales

From: VPAC: Variational projection for accurate clustering of single-cell transcriptomic data

Dataset S-Set M-Set L-Set
Model ARI NMI ARI NMI ARI NMI
VPAC 0.769 ± 0.000 0.759 ± 0.000 0.765 ± 0.000 0.765 ± 0.000 0.779 ± 0.000 0.769 ± 0.000
Para_DPMM 0.675 ± 0.008 0.696 ± 0.008 0.704 ± 0.000 0.713 ± 0.002 0.700 ± 0.002 0.711 ± 0.002
pcaReduce 0.290 ± 0.019 0.289 ± 0.010 0.279 ± 0.007 0.252 ± 0.007 0.311 ± 0.026 0.309 ± 0.044
Seurat 0.378 ± 0.000 0.379 ± 0.000 0.379 ± 0.000 0.383 ± 0.000 0.383 ± 0.000 0.383 ± 0.000
SC3 0.724 ± 0.005 0.722 ± 0.010 0.724 ± 0.009 0.717 ± 0.007 0.523 ± 0.053 0.501 ± 0.030