Fig. 5From: scruff: an R/Bioconductor package for preprocessing single-cell RNA-sequencing dataRun time benchmarks for selected scRNA-seq preprocessing packages. FASTQ files from the example dataset [23] were subsampled to have a total read number of 0.1, 0.5, 1.0, 5.0, and 10.0 million. Each of the subsampled datasets was processed by celseq2, scPipe, and scruff. All 3 packages were parallelized with 16 coresBack to article page