Fig. 9
From: PS-MCL: parallel shotgun coarsened Markov clustering of protein interaction networks
Accuracy of PS-MCL with varying skip rates, MLR-MCL, and MCL. The performance of PS-MCL varies depending on p, but is better than that of MLR-MCL in the range of 0.5≤p≤0.7. Comparing to MCL, PS-MCL is slightly less accurate. But, we observe that it is due to many dimer structures, and excluding dimers, PS-MCL greatly outperforms MCL (c). a DIP-yeast b Biogrid-homo c Biogrid-homo-dimers